News
New mRNA Expression Browser (Beta)
June 7, 2017
The browser (beta version) for the visualization of mRNA expression from CHO-K1 cells is now online. The data is from several published DNA-microarray or RNA-Seq experiments. The tutorial on how to use this browser can be found here.
Coming Soon!
March 10, 2017
Users will be able to visualize CHO cell mRNA expression data either from published DNA-microarray or RNA-Seq experiments via JBrowse. The visualized data will enable users to easily obtain gene expression levels and compare gene expression levels among different conditions.
CHOmine (BETA-Version)
August 19, 2016
CHOmine, the InterMine site for CHO and Chinese hamster, went online on August 11, 2016 at https://chomine.boku.ac.at/. CHOmine collects and integrates publicly available Chinese hamster and CHO data, where different datasets are connected to provide user-friendly access. Currently, users are asked to test the site and to provide feedback (impressions, comments, issues, and suggestions for improvements) to Matthias.Gerstl@acib.at or Nicole.Borth@boku.ac.at.
CHO-March 2012 Example Data

Spots Information
Spot No. |
Symbol |
Identification |
NCBI Protein Accession |
CHO Genome Database Link |
CHO RefSeq Database Link |
Glucosidase 2 subunit beta |
gi|344240065 |
||||
78 kDa glucose-regulated protein |
gi|344238152 |
||||
Heat shock cognate 71 kDa protein |
gi|344254754 |
||||
Clusterin |
gi|344249681 |
||||
Tubulin alpha-1A chain |
gi|344254287 |
||||
Tubulin beta-7 chain |
gi|344252973 |
||||
Calumenin |
gi|344242069 |
||||
Eukaryotic initiation factor 4A-I |
gi|344237788 |
||||
Actin, cytoplasmic 1 |
gi|344239671 |
||||
Nuclear migration protein nudC |
gi|344245839 |
||||
Nascent polypeptide-associated complex subunit alpha, muscle-specific form |
gi|344256384 |
||||
Heme oxygenase 1 |
gi|344247467 |
||||
Ferritin heavy chain |
gi|344256829 |